TAP Alfin-like in Setaria viridis

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

Alfin-like
Homeobox
zf-TAZ
PHD

(Domain names are clickable)



List of proteins (16)

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namename additionClick button to show/hide sequence: Download sequence?
Sevir.1G199500.1.ppacid=32665032 transcript=Sevir.1G199500.1 locus=Sevir.1G199500 ID=Sevir.1G199500.1.v1.1 annot-version=v1.1
Sevir.2G065200.1.ppacid=32638094 transcript=Sevir.2G065200.1 locus=Sevir.2G065200 ID=Sevir.2G065200.1.v1.1 annot-version=v1.1
Sevir.2G093500.1.ppacid=32639444 transcript=Sevir.2G093500.1 locus=Sevir.2G093500 ID=Sevir.2G093500.1.v1.1 annot-version=v1.1
Sevir.2G203200.1.ppacid=32635733 transcript=Sevir.2G203200.1 locus=Sevir.2G203200 ID=Sevir.2G203200.1.v1.1 annot-version=v1.1
Sevir.2G396000.1.ppacid=32639104 transcript=Sevir.2G396000.1 locus=Sevir.2G396000 ID=Sevir.2G396000.1.v1.1 annot-version=v1.1
Sevir.3G098000.1.ppacid=32677128 transcript=Sevir.3G098000.1 locus=Sevir.3G098000 ID=Sevir.3G098000.1.v1.1 annot-version=v1.1
Sevir.3G243900.1.ppacid=32680315 transcript=Sevir.3G243900.1 locus=Sevir.3G243900 ID=Sevir.3G243900.1.v1.1 annot-version=v1.1
Sevir.3G275100.1.ppacid=32676786 transcript=Sevir.3G275100.1 locus=Sevir.3G275100 ID=Sevir.3G275100.1.v1.1 annot-version=v1.1
Sevir.3G278800.1.ppacid=32679772 transcript=Sevir.3G278800.1 locus=Sevir.3G278800 ID=Sevir.3G278800.1.v1.1 annot-version=v1.1
Sevir.5G109200.1.ppacid=32673291 transcript=Sevir.5G109200.1 locus=Sevir.5G109200 ID=Sevir.5G109200.1.v1.1 annot-version=v1.1
Sevir.5G413100.1.ppacid=32671368 transcript=Sevir.5G413100.1 locus=Sevir.5G413100 ID=Sevir.5G413100.1.v1.1 annot-version=v1.1
Sevir.6G156800.1.ppacid=32644883 transcript=Sevir.6G156800.1 locus=Sevir.6G156800 ID=Sevir.6G156800.1.v1.1 annot-version=v1.1
Sevir.7G119500.1.ppacid=32661748 transcript=Sevir.7G119500.1 locus=Sevir.7G119500 ID=Sevir.7G119500.1.v1.1 annot-version=v1.1
Sevir.7G283400.1.ppacid=32661541 transcript=Sevir.7G283400.1 locus=Sevir.7G283400 ID=Sevir.7G283400.1.v1.1 annot-version=v1.1
Sevir.8G080600.1.ppacid=32634750 transcript=Sevir.8G080600.1 locus=Sevir.8G080600 ID=Sevir.8G080600.1.v1.1 annot-version=v1.1
Sevir.9G035000.1.ppacid=32650613 transcript=Sevir.9G035000.1 locus=Sevir.9G035000 ID=Sevir.9G035000.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum